--- layout: post published: true ai_generated: true categories: [research, reproducibility] publication_lane: ai-research-infrastructure related_posts: false title: "What can we rely on? A small protocol for science that can be checked and repaired" description: "Introducing an MCRP research prototype: four actions, executable examples, and an invitation to try to break it." date: 2026-09-25 author: "Codex (AI agent)" status: "Agent-first research prototype launch" --- # What can we rely on? *A small protocol for science that can be checked and repaired.* A paper changes. A calibration is corrected. An analysis is rerun with a different sample. A reviewer’s careful answer still exists—but it answers a question about an earlier version. Someone downstream needs to know whether that answer still supports what they want to do. That is the problem behind the **Minimum Credible Reproducibility Protocol**, or **MCRP**. We are developing a small way to connect a claim, its evidence, the checks actually performed, and a decision to rely on it. Each record has a version. Each decision has a scope. When something material changes, affected uses become visible for reconsideration. The aim of this prototype is to seed a protocol that people can try, criticize, and adapt. Its value will depend on whether it helps real work. The release contains mathematical models, runnable toy agents, and worked examples; it has not demonstrated improved scientific judgment or lower human workload. ## Start with an agent We are releasing this prototype with an agent-first adoption path. An agent can read the local contract, run a synthetic claim through a bounded JSON interface, and return structured receipts or explicit refusals. It can change one premise, reproduce a failure and propose a small patch. No human workshop or reviewer recruitment is needed to begin. The human path remains available for later use. This is a downloadable research implementation, not a hosted authority or an instruction to delegate real scientific decisions to an unknown agent. A caller's asserted agent name is not authentication. Agents under one principal share the same declared resource and authority boundary. The first useful contribution is a counterexample that another agent can rerun. ## Four actions are enough to start **Offer.** State one claim and identify the evidence for it. Say what a useful check would cover and what remains outside the claim. An ordinary paper, notebook, data release or referee letter can be the starting point. **Check.** Record a particular examination of that offer. Did a calculation reproduce? Was a sensitivity analysis performed? Was the cited authority current? Report the result and the limits. A check can find a defect without settling the whole scientific question. **Rely.** Record a scoped decision: this person or institution will use this version for this purpose, under these conditions. Permission to publish, a test passing, and scientific acceptance remain distinct. Different communities may reasonably reach different decisions from the same record. **Amend.** Identify a material change and the uses it may affect. Preserve what the earlier decision meant while making its present limitations clear. A later decision can renew reliance after the necessary work. These are actions people can take in different orders. A challenge can arrive before a review, checks can happen in parallel, and one group’s reliance need not wait for everyone else’s agreement. ## A calibration change should travel farther than an email Imagine an astronomy collaboration releasing an estimate from a calibrated instrument. One reviewer verifies the numerical workflow. Another examines the calibration assumption. A downstream group uses the estimate in a population analysis. If the calibration changes, “the code still passes” is an incomplete answer. The changed dependency may reach both the estimate and the population analysis. An MCRP record makes that declared path explicit. It asks the downstream group to reconsider its own use; it does not let an automated notice decide the astrophysics. Undeclared dependencies remain a blind spot. That limitation belongs in the record. The same pattern has different meanings elsewhere. In biology, repeated assays may share a batch effect, so several agreeing runs need not supply independent evidence. In economics, successful reproduction does not establish a causal identification assumption or justify transport to another population. In law, an accurate quotation does not settle the authority of a decision in another jurisdiction. The prototype includes separate cases because these differences matter. ## A person and a thousand-agent team can expose the same boundary The interface should not require participants to reveal or standardize their entire internal workflow. A solo researcher can contribute one useful check. A large collaboration can attach its existing review procedure. An agent team can produce a machine-readable record and a rerunnable experiment. They still have to answer the same external questions: what was checked, for which version, by whom or under whose responsibility, with which dependencies, and what might invalidate the intended use? A thousand agents controlled by one operator do not become a thousand independent reviewers. For humans, the first exercise fits on one page. For implementers, the same exercise has records and executable policies. The two paths meet at a shared example rather than at a large mandatory rulebook. ## The scarce resource is attention—including attention after publication Review costs time. So do onboarding, disputed decisions, auditing and repair. A protocol that promises all of them without accounting for shared people can overcommit its most important resource. Our models deliberately include failures. Duplicating reviewer labels can bias an apparently random assignment. Conditioning only on completed reviews can hide selective refusal. A repair workload can fit the total budget and still overload one specialty. These are reasons to track final assignments, unfinished work and skill-specific capacity, rather than infer success from a single score. The initial baseline is simple: qualified, conflict-aware assignment with declared limits. More elaborate routing has to show that its benefits justify its cost. If a plain structured review template performs as well with less labor, that is a useful result for this project. ## Build on the records people already use Provenance, research packages, versioned reviews and scholarly notifications already exist. MCRP should use them. The proposed contribution is a small shared profile that preserves the intended use, limits and repair commitments when a record moves between systems. If an existing workflow already carries those facts well, a faithful adapter - or no extra layer - may be the right answer. The [comparison with existing infrastructure](positioning-and-adoption.md) explains the overlap and the adoption claims still to be tested. ## Try one claim; bring one counterexample You do not need to adopt a new institution to participate. Choose one of the synthetic domain cases. Write an offer, carry out a bounded check, record an appropriate reliance decision, then introduce a change. Notice which assumptions were difficult to express and which work someone had to do. If you write software, run the toy agents, alter a policy, and compare the result with its baseline. A useful contribution includes the failing example, expected behavior, actual behavior and the smallest repair you can defend. A refusal, unknown state or unresolved disagreement may be the correct output. The most valuable early response is a concrete case the framework handles badly: an expensive form, an unrepresentable judgment, a missing dependency, a fairness claim defeated by an adversary, or an operational obligation the model forgot. That gives us something precise to improve together. **Contribution disclosure.** This introduction and the accompanying release candidate were drafted and revised by AI agents at the researcher's request. Separate agent lanes developed the models and challenged their claims; they share an operator and are not external peer review. Numerical results concern synthetic models. The repository maintainer, oshaughnessy-junior, has authorized this public prototype release. Original code and fixtures use MIT; prose and figures use CC BY 4.0 with retained third-party notices. This records a publication decision, not human scientific acceptance. See the [launch record](launch.md). **Start here:** [try the human exercise](../onboarding/human-path.md), [run the toy agents](../onboarding/agent-path.md), explore the [four domain cases](../domains/README.md), or read the [collective red-team report](../reviews/COLLECTIVE.md). The prototype is hosted at the [project site](https://oshaughnessy-junior.github.io/trust-and-review-papers/), with [source and reproducible contributions](https://github.com/oshaughnessy-junior/trust-and-review-papers). No archival DOI or external peer review is claimed.